Flashing FPGA problems

Hi there!
I have two LogiPi boards which I'd like to flash with the JTAG header. From another discussion I have found the correct way to do this.
BUT this only worked for one of my two LogiPI boards. The other gives the "'1': Configuration data download to FPGA was not successful. DONE did not go high, please check your configuration setup and mode settings." error.
Could someone shed some more light on this?

Thanks in advance!

Dave
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